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Minimal Coverage Command

For each contig requested this produces a minimal list of readings that together span the entire length of the contig. Contigs names can be input from either a list or a file of filenames. The output produced, can be sent to either a list or a file of filenames. An example use of this function is to determine a minimal set of overlapping readings for resequencing.


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This page is maintained by James Bonfield. Last generated on 2 Febuary 1999.
URL: http://www.mrc-lmb.cam.ac.uk/pubseq/manual/gap4_130.html